Last update: April 29, 2009.

Publications: Alphabetical order

Below are listed publications authored or co-authored by present members of the Biomedical Optics Research Laboratory on scientific and clinical topics directly related to biomedical optics since 1986. Articles by past members are also included where the publication was submitted while the author/co-author was working with the laboratory. The list includes articles in peer-reviewed journals, conference proceedings, and book chapters. Publications are listed here in alphabetical order of first author name.

Click on letter to jump to first letter of surname: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

• Aladangady, N, Leung, TS, Costeloe, K, and Delpy, DT (2008): Measuring circulating blood volume in newborn infants using pulse dye densitometry and indocyanine green, Pediatric Anesthesia 18, 865-871. Download PDF file.
• Aldrich, CJ, Wyatt, JS, Spencer, JAD, Reynolds, EOR, and Delpy, DT (1994): The effect of maternal oxygen administration on human fetal cerebral oxygenation measured during labour by near infrared spectroscopy. British Journal of Obstetrics & Gynaecology 101, 509-513.
• Aldrich, CJ, D'Antona, D, Spencer, JAD, Wyatt, JS, Peebles, DM, Delpy, DT, and Reynolds, EOR (1995): Late fetal heart decelerations and changes in cerebral oxygenation during the first stage of labour. British Journal of Obstetrics and Gynaecology 102(1), 9-13.
• Aldrich, CJ, D'Antona, D, Spencer, JAD, Wyatt, JS, Peebles, DM, Delpy, DT, and Reynolds, EOR (1995): The effect of maternal posture on fetal cerebral oxygenation during labour with epidural anaesthesia measured by near infrared spectroscopy. British Journal of Obstetrics and Gynaecology 102(1), 14-19.
• Aldrich, CJ, D'Antona, D, Spencer, JAD, Wyatt, JS, Peebles, DM, Delpy, DT, and Reynolds, EOR (1995): The effect of maternal pushing on fetal cerebral oxygenation and blood-volume during the second stage of labour. British Journal of Obstetrics and Gynaecology 102(6), 448-453.
• Aldrich, CJ, D'Antona, D, Spencer, JAD, Delpy, DT, Reynolds, EOR, and Wyatt, JS (1996): Fetal heart-rate changes and cerebral oxygenation measured by near-infrared spectroscopy during the first stage of labour. European Journal of Obstetrics Gynecology and Reproductive Biology 64(2), 189-195. Download PDF file
• Aldridge, R, Cady, EB, Cope, M, et al. (1988): Simultaneous measurements of cerebral oxygenation and metabolites by near-infrared and 31P nuclear magnetic resonance spectrocopy during hypoxia in rats. Journal of Physiology 396, 96P.
• Allen, TJ, Cox, BT, and Beard, PC (2005): Generating photoacoustic signals using high peak power laser diodes, Proc. SPIE 5697, 233-242. Download PDF file.
• Allen, TJ, and Beard, PC (2006): Pulsed NIR laser diode excitation system for biomedical photoacoustic imaging, Optics Letters 31(23), 3462 - 3464. Download PDF file.
• Allen, TJ, and Beard, PC (2007): Dual wavelength laser diode excitation source for 2D photoacoustic imaging, Proc SPIE 6437, 64371U-1-9. Download PDF file.
• Allen, TJ and Beard, PC (2009): Photoacoustic characterisation of vascular tissue at NIR wavelengths, Proc. SPIE 7177, 71770A. Download PDF file.
• Arridge, SR, Cope, M, van der Zee, P, Hillson, PJ, and Delpy, DT (1986): Near infrared transillumination as a method of visualisation and measurement of the oxygenation state of brain and muscle in newborn infant. In: Recent developments in medical and physiological imaging. Editors: Clark, RP, and Goth, MR, (Taylor & Francis: London), 24-31.
• Arridge, SR, Cope, M, van der Zee, P, Hillson, PJ, and Delpy, DT (1986): Visualisation of the oxygenation state of brain and muscle in newborn infants by near infrared transillumination. In: Information processing in medical imaging. Editor: Bacharach, SL, (Martinus Nijhoff: New York), 155-176.
• Arridge, SR, van der Zee, P, Delpy, DT, and Cope, M (1989): Particle sizing in the Mie scattering region: singular value analysis. Inverse Problems 5, 671-689. Download PDF file
• Arridge, SR (1989): A note on the spherical harmonic expansion of the Mie scattering kernel. Journal of Modern Optics 36(6), 685-692. Download PDF file
• Arridge, SR, van der Zee, P, Cope, M, and Delpy, DT (1990): New results for the development of infrared absorption imaging. Proc. SPIE 1245, 92-103.
• Arridge, SR, van der Zee, P, Cope, M, and Delpy, DT (1991): Reconstruction methods for infrared absorption imaging. Proc. SPIE 1431, 204-217. Download PDF file
• Arridge, SR, van der Zee, P, Delpy, DT, and Cope, M (1992): Aspects of clinical infrared absorption imaging. In: The Formation, Handling and Evaluation of Medical Images. Editors: Todd-Pokropek, A, and Viergever, MA, (Springer-Verlag: Berlin), 407-418.
• Arridge, SR, Cope, M, and Delpy, DT (1992): The theoretical basis for the determination of optical pathlengths in tissue: temporal and frequency analysis. Physics in Medicine and Biology 37(7), 1531-1560. Download PDF file
• Arridge, SR, Schweiger, M, and Delpy, DT (1992): Iterative reconstruction of near-infrared absorption images. Proc. SPIE 1767, 372-383.
• Arridge, SR, Schweiger, M, Hiraoka, M, and Delpy, DT (1993): A finite element approach for modelling photon transport in tissue. Medical Physics 20, 299-309. Download PDF file
• Arridge, SR, Schweiger, M, Hiraoka, M, and Delpy, DT (1993): Performance of an iterative reconstruction algorithm for near infrared absorption and scatter imaging. Proc. SPIE 1888, 360-371. Download PDF file
• Arridge, SR, and Schweiger, M (1993): The use of multiple data types in time-resolved optical absorption and scattering tomography (TOAST). Proc. SPIE 2035, 218-229.
• Arridge, SR, and Schweiger, M (1993): Inverse Methods for Optical Tomography. In: Information Processing in Medical Imaging, Editors: Barrett, HH, and Gmitro, AF, (Springer-Verlag: Berlin), 259-277.
• Arridge, SR (1993): Forward and inverse problems in time-resolved infrared imaging. In: Medical Optical Tomography: Functional Imaging and Monitoring, Editor: Muller, G, SPIE-IS11, 35-64.
• Arridge, SR (1995): Photon-measurement density-functions I: Analytical forms. Applied Optics 34(31), 7395-7409. Download PDF file
• Arridge, SR, Hiraoka, M, and Schweiger, M (1995): Statistical basis for the determination of optical pathlength in tissue. Physics in Medicine and Biology 40(9), 1539-1558. Download PDF file
• Arridge, SR, and Schweiger, M (1995): Photon-measurement density-functions II: Finite-element-method calculations. Applied Optics 34(34), 8026-8037. Download PDF file
• Arridge, SR, and Schweiger, M (1995): Direct calculation of the moments of the distribution of photon time-of-flight in tissue with a finite-element method. Applied Optics 34(15), 2683-2687. Download PDF file
• Arridge, SR, and Schweiger, M (1995): Sensitivity to prior knowledge in optical tomographic reconstruction. Proc. SPIE 2389, 378-388.
• Arridge, SR, Hiraoka, M, and Schweiger, M (1995): Modelling of noise for near-infrared transillumination imaging. Proc. SPIE 2389, 389-399.
• Arridge, SR, and Schweiger, M (1995): Reconstruction in optical tomography using MRI based prior knowledge. In: Information Processing in Medical Imaging, Editors: Bizais, Y, Barillot, C, and diPaola, R, (Kluwer Academic Publishers: Dordrecht), 77-88.
• Arridge, SR, and Hebden, JC (1997): Optical imaging in medicine II: Modelling and reconstruction. Physics in Medicine and Biology 42(5), 841-853. Download PDF file.
• Arridge, SR, and Schweiger, M (1997): Image reconstruction in optical tomography. Philosophical Transactions of the Royal Society of London Series B-Biological Sciences 352(1354), 717-726. Download PDF File.
• Arridge, SR, and Schweiger, M (1998): A gradient-based optimisation scheme for Optical Tomography. Optics Express 2(6), 213-226. Download PDF File.
• Arridge, SR, and Lionheart, WRB (1998): Non-uniqueness in diffusion-based optical tomography. Optics Letters 23(11), 882-884. Download PDF File.
• Arridge, SR, and Schweiger, M (1998): A general framework for iterative reconstruction algorithms in optical tomography using a finite element method. In: Computational Radiology and Imaging: therapy and Diagnosis, Editors: Borgers, C, and Natterer, F, IMA Volumes in Mathematics and its Applications, (Springer-Verlag: Berlin), (In Press)
• Arridge, SR (1999): Optical tomography in medical imaging. Inverse Problems 15(2), 41-93. Download PDF File.
• Arridge, SR, Dehghani, H, Schweiger, M, and Okada, E (2000): The finite element model of the propagation of light in scattering media: A direct method for domains with nonscattering regions, Medical Physics 27(1), 252-264. Download PDF File.
• Arridge, SR, and Schweiger, MA (1999): A general framework for iterative reconstruction algorithms in optical tomography using a finite element method. In "Computational Radiology and Imaging - Therapy and Diagnostics," Editors Boergers, C, and Natterer, F, (Springer, New York) 45-70.
• Arridge, SR, Hebden, JC, Schweiger, M, Schmidt, FEW, Fry, ME, Hillman, EMC, Dehghani, H, and Delpy, DT (2000): A method for 3D time-resolved optical tomography, International Journal for Imaging Systems and Technology 11, 2-11. Download PDF file.
• Arridge, SR (2001): Diffusion tomography in dense media, In "Scattering: scattering and inverse scattering in pure and applied science," Ed. Pike, R, and Sabatier, P. (Academic Press: London), pp. 920-936.
• Arridge, SR, Kaipio, JP, Kolehmainen, V, Schweiger, M, Somersalo, E, Tarvainen, T, and Vauhkonen, M (2006): Approximation errors and model reduction with an application in optical diffusion tomography, Inverse Problems 22, 175-195. Download PDF file
• Arridge, SR, Kolehmainen, V, and Schweiger, M (2008): Reconstruction and Regularisation in Optical Tomography, Proc. Interdisciplinary Workshop on Mathematical Methods in Biomedical Imaging and Intensity-Modulated Radiation Therapy (IMRT), (eds: Y. Censor and M. Jiang and A. Louis), Pubblicazioni del Centro De Giorgi, 1-18.
• Arridge, SR, Dorn, O, Kolehmainen, V, Schweiger, M, and Zacharopoulos, A (2008): Parameter and structure reconstruction in optical tomography, Proc. International Conference on Inverse Problems in Engineering : Theory and Practice, 15-19 June 2008, Dourdan (Paris), France, Journal of Physics: Conference Series 124, 012001, IOP Publishing. Link to online paper.
• Arridge, SR, Panagiotou, C, Schweiger, M. and Kolehmainen, V (2008): Multimodal Diffuse Optical Tomography : Theory', In: Translational multimodality optical imaging, (Chapter 5), eds: F.S. Azar and X. Inters, Artech Press, 101-124.
• Austin, T, Gibson, AP, Branco, G, Yusof, R, Arridge, SR, Meek, JH, Wyatt, JS, Delpy, DT, and Hebden, JC (2006): Three-dimensional optical imaging of blood volume and oxygenation in the preterm brain, Neuroimage 31, 1426-1433. Download PDF file.
• Austin, T (2007): Optical imaging of the neonatal brain, Archives of Disease in Childhood 92, F238-F241. Download PDF file.
  
• Banaji, M, Tachtsisdis, I, Delpy, DT, and Baigent, S (2005): A physiological model of cerebral blood flow control, Mathematical Biosciences 194, 125-173. Download PDF File.
• Bassi, A, D'Andrea, C, Valentini, G, Cubeddu, R, and Arridge, SR (2008): Temporal propagation of spatial information in turbid media, Optics Letters, 33(23).
• Beard, PC, and Mills, TN (1996): Extrinsic optical fibre ultrasound sensor using a thin polymer film as a low finesse Fabry-Perot interferometer, Applied Optics 35(4), 663-675. Download PDF file (347k).
• Beard, PC, and Mills, TN (1997): Characterisation of post mortem arterial tissue using time-resolved photoacoustic spectroscopy at 436nm, 461nm and 532nm, Physics in Medicine and Biology 42(1), 177-198. Download PDF file (228k).
• Beard, PC, and Mills, TN (1997): A miniature optical fibre ultrasonic hydrophone using a Fabry Perot polymer film interferometer, Electronics Letters 33(9), 801-803. Download PDF file (412k).
• Beard, PC, Perennes, F, Draguioti, E, and Mills TN (1998): An optical fibre photoacoustic-photothermal probe, Optics Letters 23(15), 1235-1237. Download PDF file (290k).
• Beard, PC, Hurrell, A, van den Elzen, E, and Mills, TN (1998): Comparison of a miniature ultrasonic optical fibre hydrophone with PVDF hydrophone technology, Proc. IEEE Ultrasonics Symposium, 1881-1884. Download PDF File.
• Beard, PC, Perennes, F, and Mills, TN (1999): Transduction mechanisms of the Fabry Perot polymer film sensing concept for wideband ultrasound detection, IEEE Transactions on Ultrasonics, Ferroelectrics and Frequency control 46(6), 1575-1582. Download PDF file (209k).
• Beard, PC, Perennes F, and Mills TN (1999): Pulsed photoacoustic characterisation of arterial tissues, Proc. SPIE Laser Tissue Interaction X, BIOS '99, San Jose.
• Beard, PC, and Mills, TN (2000): An optical detection system for biomedical photoacoustic imaging, Proc. SPIE 3916, 100-109. Download PDF file (362k).
• Beard, PC, and Mills, TN (2000): A 2D optical ultrasound array using a polymer film sensing interferometer, Proc. IEEE Ultrasonics Symposium, 1183-1186. Download PDF file (94k).
• Beard, PC, Hurrell, A, and Mills, TN (2000): Characterisation of a polymer film optical fibre hydrophone for the measurement of ultrasound fields for use in the range 1-30MHz: a comparison with PVDF needle and membrane hydrophones, IEEE Transactions on Ultrasonics, Ferroelectrics and Frequency control 47(1), 256-264. Download PDF file (497k).
• Beard, PC, and Mills, TN (2001): 2D line scan photoacoustic imaging of absorbers in a scattering tissue phantom, Proc. SPIE 4256, 34-42. Download PDF file (202k).
• Beard, PC (2002): Photoacoustic imaging of blood vessel equivalent phantoms, Proc. SPIE 4618, 54-62. Download PDF file (538k).
• Beard, PC (2003): Interrogation of Fabry Perot sensing interferometers by angle tuning, Measurement Science and Technology 14, 1998-2005. Download PDF file (309k).
• Beard, PC, Zhang, EZ, and Cox, BT (2004): Transparent Fabry Perot polymer film ultrasound array for backward-mode photoacoustic imaging, Proc. SPIE 5320, 230-237. Download PDF file.
• Beard, PC (2005): 2D ultrasound receive array using an angle-tuned Fabry Perot polymer film sensor for transducer field characterisation and transmission ultrasound imaging, IEEE Transactions on Ultrasonics, Ferroelectrics and Frequency control, 52(6), 1002-1012. Download PDF file.
• Becker, W, Bergmann, A, Gibson, A, Everdell, N, Jennions, D, Schweiger, M, Arridge, SR, and Hebden, JC (2005): Multi-dimensional time-correlated single photon counting applied to diffuse optical tomography, Proc. SPIE 5693, 34-42.
• Binzoni, T, Cerretelli, P, Ferrari, M, and Delpy, DT (1997): Metabolic studies of human skeletal muscle by near infrared spectroscopy: possible applications in space research. International Journal of Sports Medicine 18, S312-S314.
• Binzoni, T, Springett, R, Dalton, JCP, Delpy, DT (1999): A new combined deep body tempwrature/NIR spectroscopy probe for non invasive metabolic measurements on human skeletal muscle, Advances in Experimental Medicine & Biology 471, 623-629. Download PDF file.
• Binzoni, T, Hiltbrand, E, Terrier, F, Cerretelli, P, and Delpy, DT (2000): Temperature dependence of human gastrocnemius pH and high energy phosphates content by non invasive techniques. Magnetic Resonance in Medicine 43, 611-614. Download PDF File.
• Binzoni, T, Leung, TS, Boggett, D, and Delpy, DT (2002): A new near infrared laser-Doppler flowmeter for deep tissue perfusion monitoring, Magnetic Resonance Materials in Physics, Biology and Medicine 14(2), 74-75. Download PDF File.
• Binzoni, T, Ngo, L, Hiltbrand, E, Springett, R, and Delpy, DT (2002): Non standard O2 consumption- temperature curves during rest and isometric exercise in human skeletal muscle. Comparative Biochemistry & Physiology A 132, 27-32. Download PDF File.
• Binzoni, T, Leung, TS, Boggett, D, and Delpy, DT (2003): Non invasive laser Doppler perfusion measurements of large tissue volumes and human skeletal muscle blood RMS velocity, Physics in Medicine and Biology 48, 2527-2549. Download PDF File.
• Binzoni, T, Leung, TS, Hollis, V, Bianchi, S, Fasel, JHD, Bounameaux, H, Hiltbrand, E, and Delpy, DT (2003): Human tibia bone marrow: defining a model for the study of haemodynamics as a function of age by near infrared spectroscopy, Journal of Physiol. Anthropol. Appl. Human Sci. 22, 211-218. Download PDF File.
• Binzoni, T, Leung, TS, Delpy, DT, Fauci, MA, and Rufenacht, D (2004): Mapping human skeletal muscle perforator vessels using a quantum well infrared photodetectors (QWIP) might explain the variability of NIRS and LDF measurements, Physics in Medicine and Biology 49, N165-N173. Download PDF File.
• Binzoni, T, Leung, TS, Seghier, ML, and Delpy, DT (2004): Translational and Brownian motion in laser-Doppler flowmetry of large tissue volumes, Physics in Medicine Biology 49, 5445-5458. Download PDF file.
• Binzoni, B, Courvoisier, C, Giust, R, Tribillon, G, Gharbi, T, Hebden, JC, Leung, TS, Roux, J, and Delpy, DT (2006): Anisotropic photon migration in human skeletal muscle, Physics in Medicine and Biology 51, N79-N90. Download PDF file.
• Binzoni, T, Leung, TS, Rufenacht, D, and Delpy, DT (2006): Absorption and scattering coefficient dependence of laser Doppler flowmetry models for large tissue volumes, Physics in Medicine and Biology 51, 311-333. Download PDF file.
• Binzoni, T, Leung, TS, Giust, R, Rufenacht, D, and Gandjbakhche, AH, (2008): Light transport in tissue by 3D Monte Carlo:influence of boundary voxelization, Computer Methods and Programs in Biomedicine 89, 14-23. Download PDF file.
• Blasi, A, Fox, S, Everdell, N, Volein, A, Tucker, L, Csibra, G, Gibson, AP, Hebden, JC, Johnson, MH, and Elwell, CE (2007): Investigation of depth dependent changes in cerebral haemodynamics during face perception in infants, Physics in Medicine and Biology 52, 6849-6864. Download PDF file.
• Boas, DA, Gaudette, T, and Arridge, SR (2001): Simultaneous imaging and optode calibration with diffuse optical tomography, Optics Express 8(5), 263-270. Download PDF File.
• Brown, DW, Picot, P, Springett, R, Delpy, DT, and Lee, TY (2001): Comparison of near infrared spectroscopy with CT cerebral blood flow measurements in newborn piglets. Proc SPIE 4321, 168-176.
• Brown, DW, Picot, P, Gharavi, J, Springett, R, Delpy, DT, Menon, R, Han, V, Lee, TY (2002): Quantitative NIRS measurement of cerebral hemodynamics in newborn piglets. Pediatric Research 51, 564-570. Download PDF File.
• Brown, EM, Leung, TS, Collis, W ,and Salmon AP (2008): Heart sounds made easy (with CD ROM), 2nd Edition, Elsevier Science (Edinburgh). Link to Amazon website.
  
• Chance, B, Cope, M, Gratton, E, Ramanujam, N, and Tromberg, B (1998): Phase measurement of light absorption and scatter in human tissues. Review of Scientific Instruments 69, 3457-3481. Download PDF File.
• Cheatle, TR, Potter, LA, Cope, M, Delpy, DT, Coleridge-Smith, PD, and Scurr, JH (1991): Near infrared spectroscopy in peripheral vascular disease. British Journal of Surgery 78, 405-408.
• Chernomordik, V, Hebden, JC, Nossal, R, and Gandjbakhche, AH (1998): A new algorithm based on time-dependent contrast functions used to evaluate optical characteristics of an abnormality hidden within a tissue-like phantom, OSA Trends in Optics and Photonics on Advances in Optical Imaging and Photon Migration, Editors: Alfano, RR, and Fujimoto, JG, (OSA, Washington DC) 21, 209-212.
• Chernomordik, V, Gandjbakhche, AH, Hebden, JC, and Zaccanti, Z (1999): Random walk model of the effect of the lateral boundaries on time-resolved measurements in optical tomography, Proc. SPIE 3597, 136-145.
• Chernomordik, V, Gandjbakhche, AH, Hebden, JC, and Zaccanti, Z (1999): Effect of the lateral boundaries on contrast functions in time-resolved transillumination measurements, Medical Physics 26, 1822-1831. Download PDF file.
• Chernomordik, V, Hattery, D, Gandjbakhche, AH, Pifferi, A, Valentini, G, Cubeddu, R, and Hebden, JC (1999): Quantitative imaging in time-resolved transillumination experiments using time-dependent contrast functions, Proc. SPIE 3597, 398-402.
• Chiang, TC, Vaithianathan, T, Leung,TS, Lavidor, M, Walsh, V, and Delpy, DT (2007): Elevated haemoglobin levels in the motor cortex following 1 Hz transcranial magnetic stimulation: a preliminary study, Experimental Brain Research 181(4), 555-560. Download PDF file.
• Chipchase, J, Kirkby, DR, Cope, M, and Peebles, D (In press): Absolute cerebral haemoglobin concentration and oxygen saturation measurements with an intensity modulated optical spectrometer in the fetus during labour, Proc. Third International Symposium on Intrapartum Surveillance, Stockholm.
• Choe, R, Corlu, A, Lee, K, Durduran, T, Konecky, SD, Grosicka-Koptyra, M, Arridge, SR, Czerniecki, BJ, Fraker, DL, DeMichele, A, Chance, B, Rosen, MA, and Yodh, AG (2005): Diffuse optical tomography of breast cancer during neoadjuvant chemotherapy: A case study with comparison to MRI, Medical Physics 32(4), 1128-1139. Download PDF file.
• Clemence, M, Springett, R, Thornton, JS, Penrice, J, Amess, P, Punwani, P, Wyatt, JS, Ordidge, RJ, and Cady, EB (1998): Near infrared spectroscopy shows pathlength changes which correlate with T2 in a piglet model of cerebral hypoxia-ischaemia. MAGMA 5, 54.
• Colley, CS, Hebden, JC, Delpy, DT, Cambrey, AD, Brown, RA, Zibik, EA, Ng, WH, Wilson, LR, and Cockburn, JW (2008): Mid-infrared optical coherence tomography, Review of Scientific Instruments 78, 123108. Download PDF file.
• Cooper, CE, Matcher, SJ, Wyatt, JS, Cope, M, Brown, GC, Nemoto, EM, and Delpy, DT (1994): Near-infrared spectroscopy of the brain - relevance to cytochrome-oxidase bioenergetics. Biochemical Society Transactions 22(4), 974-980.
• Cooper, CE, Elwell, CE, Meek, JH, Matcher, SJ, Penrice, J, Tyszczuk, L, Amess, P, Wyatt, JS, and Delpy, DT (1995): Noninvasive measurement of absolute deoxy-hemoglobin concentration in the neonatal brain. Pediatric Research 38(3), 429.
• Cooper, CE, Elwell, CE, Meek, JH, Matcher, SJ, Wyatt, JS, Cope, M, and Delpy, DT (1996): The noninvasive measurement of absolute cerebral deoxyhemoglobin concentration and mean optical-path length in the neonatal brain by second derivative near-infrared spectroscopy. Pediatric Research 39(1), 32-38. Download PDF file
• Cooper, CE, Springett, R, Panagiotopoulou, and Penrice, J (1996): Near infrared spectroscopy of nitrosyl haemoglobin - relevance to in vivo detection of nitric oxide. Biochemical Society Transactions 24, 448S.
• Cooper, CE, and Delpy, DT (1997): Introduction. Philosophical Transactions of the Royal Society of London Series B-Biological Sciences 352(1354), 647-648. Download PDF File.
• Cooper, CE, and Springett, R (1997): Measurement of cytochrome oxidase and mitochondrial energetics by near-infrared spectroscopy. Philosophical Transactions of the Royal Society of London Series B-Biological Sciences 352(1354), 669-676. Download PDF File.
• Cooper, CE, Cope, M, Quaresima, V, Ferrari, M, Nemoto, E, Springett, R, Matcher, SJ, Amess, P, Penrice, J, Tyszczuk, L, Wyatt, JS, and Delpy, DT (1997): Measurement of cytochrome oxidase redox state by near infrared spectroscopy. Advances in Experimental Medicine and Biology 413, 63-73. Download PDF file.
• Cooper, CE, Sharpe, M, Elwell, CE, Springett, R, Penrice, J, Tyszczuk, L, Amess, P, Wyatt, JS, Quaresima, V, and Delpy, DT (1997): The cytochrome oxidase redox state in vivo. Advances in Experimental Medicine and Biology 428, 449-456.
• Cooper, CE, Delpy, DT, and Nemoto, EM (1998): The relationship of oxygen delivery to absolute haemoglobin oxygenation and mitochondrial cytochrome oxidase redox state in the adult brain: a near infrared spectroscopy study. Biochemistry Journal 332, 627-632. Download PDF File.
• Cooper, C, Cope, M, Springett, R, Amess, P, Penrice, J, Tyszczuk, L, Punwani, S, Ordidge, R, Wyatt, JS, and Delpy, DT (1999): Use of mitochondrial inhibitors to demonstrate that cytochrome oxidase near infrared spectroscopy can measure mitochondrial dysfunction non invasively in the brain. Journal of Cerebral Blood Flow and Metabolism 19, 27-38. Download PDF File.
• Cooper, RJ, Everdell, NL, Enfield, LC, Gibson, AP, Worley, A, and Hebden, JC (2009): Design and evaluation of a probe for simultaneous EEG and near-infrared imaging of cortical activation. Physics in Medicine and Biology 54, 2093-2102. Download PDF File.
• Cope, M, and Delpy, DT (1988): System for long-term measurement of cerebral blood and tissue oxygenation on newborn infants by near-infrared transillumination. Medical & Biological Engineering & Computing 26, 289-294.
• Cope, M, Delpy, DT, Reynolds, EOR, Wray, S, Wyatt, JS, and van der Zee, P (1988): Methods of quantitating cerebral near infrared spectroscopy data. Advances in Experimental Medicine and Biology 222, 183-189. Download PDF file.
• Cope, M, Delpy, DT, Wray, S, Wyatt, JS, and Reynolds, EOR (1989): A CCD spectrophotometer to quantitate the concentration of chromophores in living tissue utilizing the absorption peak of water at 975 nm. Advances in Experimental Medicine and Biology 247, 33-40.
• Cope, M, van der Zee, P, Essenpreis, M, Arridge, SR, and Delpy, DT (1991): Data analysis methods for near infrared spectroscopy of tissue: problems in determining the relative cytochrome aa3 concentration. Proc. SPIE 1431, 251-262. Download PDF file
• Corlu, A, Choe, R, Durduran, T, Lee, K, Schweiger, M, Arridge, SR, Hillman, EMC, Yodh, AG (2005): Diffuse optical tomography with spectral constraints and wavelength optimization, Applied Optics 44(11), 2082-2093. Download PDF file.
• Cox, BT, and Beard, PC (2007): Frequency dependent directivity of a planar Fabry Perot polymer film ultrasound sensor, IEEE Transactions on Ultrasonics, Ferroelectrics and Frequency control 54, 394-404. Download PDF file.
• Cox, BT, Laufer, J, Köstli, K, and Beard, PC (2004): Experimental Validation of Photoacoustic k-Space Propagation Models, Proc. SPIE 5320, 238-248. Download PDF file.
• Cox, BT, Zhang, EZ, Laufer, JG, and Beard, PC (2004): Fabry Perot polymer film fibre-optic hydrophones and arrays for ultrasound field characterisation, Journal of Physics: Conference Series, Advanced Metrology for Ultrasound in Medicine 2004 (AMUM 2004), 32-37. Download PDF file.
• Cox, BT, and Beard, PC (2005): Fast calculation of pulsed photoacoustic fields using k-space methods, Journal of the Acoustics Society of America 117, 3616-3627. Download PDF file.
• Cox, BT, Arridge, SR, Köstli, KP, and Beard, PC (2005): Quantitative photoacoustic imaging: fitting a model of light transport to the initial pressure distribution, Proc. SPIE 5697, 49-55. Download PDF file.
• Cox, BT, Arridge, SR, Kostli, KP, and Beard, PC (2006): 2D quantitative photoacoustic image reconstruction of absorption distributions in scattering media using a simple iterative method, Applied Optics 45, 1866-1875. Download PDF file.
• Cox, BT, Arridge, SR, and Beard, PC (2006): Quantitative photoacoustic image reconstruction for molecular imaging, Proc. SPIE 6086, 60861M. Download PDF file.
• Cox, BT, Arridge, SR, and Beard, PC (2007): Gradient-Based Quantitative Photoacoustic Image reconstruction for Molecular Imaging, Proc SPIE Vol 6437, 64371T-1-10. Download PDF file.
• Cox, BT, and Beard, PC (2007): Exact photoacoustic image reconstruction using a planar sensor array and image sources, Proc SPIE 6437, 64371H-1-8. Download PDF file.
• Cox, BT, Arridge, SR, and Beard, PC (2007): Gradient-Based Quantitative Photoacoustic Image reconstruction for Molecular Imaging, Proc SPIE Vol 6437, 64371T-1-10. Download PDF file.
• Cox, BT, and Beard, PC (2007): Exact photoacoustic image reconstruction using a planar sensor array and image sources, Proc SPIE 6437, 64371H-1-8. Download PDF file.
• Cox, BT, Arridge, SR, and Beard, PC (2007): K-space propagation models for acoustically heterogeneous media: application to biomedical photoacoustics, Journal of the Acoustical Society of America 121, 3453-3464. Download PDF file.
• Cox, BT, Arridge, SR, and Beard, PC (2007): Photoacoustic tomography with a limited-aperture planar sensor and a reverberant cavity, Inverse Problems 23, S95–S112. Download PDF file.
• Cox, BT, Arridge, SR, and Beard, PC (2008): Simultaneous Estimation of Chromophore Concentration and scattering distributions from multiwavelength photoacoustic images, Proc. SPIE 6856.
• Cox, BT, Arridge, SR, and Beard, PC (2008): Photoacoustic tomography using reverberant field data from a single detector, Proc. SPIE 6856.
• Cox, BT, Arridge, SR, and Beard, PC (2009): Estimating chromophore distributions from multiwavelength photoacoustic images, Journal of the Optical Society of America A 26(2), 443-445. Download PDF file.
• Cox, BT, Laufer, JG, and Beard, PC (2009): The challenges for quantitative photoacoustic imaging, Proc. SPIE 7177, 717713. Download PDF file.
• Cox, BT, and Beard, PC (2009): Photoacoustic tomography with a single detector in a reverberant cavity, Journal of the Acoustical Society of America 25(3), 1426-1436. Download PDF file.
• Csibra, G, Henty, J, Volein, A, Elwell, C, Tucker, L, Meek, J, and Johnson, MH (2004): Near infrared spectroscopy reveals neural activation during face perception in infants and adults, Journal of Paediatric Neurology 2(2), 85-89.
  
• D'Antona, D, Aldrich, CJ, Spencer, JAD, Delpy, DT, Reynolds, EOR, and Wyatt, JS (1995): Effect of nuchal cord on fetal cerebral hemodynamics and oxygenation measured by near-infrared spectroscopy during labour. European Journal of Obstetrics Gynecology and Reproductive Biology 59(2), 205-209. Download PDF file
• D'Antona, D, Aldrich, CJ, O'Brien, P, Lawrence, S, Delpy, DT, and Wyatt, JS (1997): Recent advances in fetal near infrared spectroscopy. Journal of Biomedical Optics 2(1), 15-21. Download PDF File.
• De Blasi, RA, Cope, M, and Ferrari, M (1992): Oxygen consumption of human skeletal muscle by near infrared spectroscopy during tourniquet-induced ischemia in maximal voluntary contraction. Advances in Experimental Medicine and Biology 317, 771-777. Download PDF file.
• De Blasi, RA, Cope, M, Elwell, CE, Safoue F, and Ferrari, M (1993): Noninvasive measurement of human forearm oxygen consumption by near infrared spectroscopy. European Journal of Applied Physiology and Occupational Physiology 67, 20-25.
• De Blasi, RA, Alviggi, I, Cope, M, Elwell, CE, and Ferrari, M (1994): Noninvasive measurement of forearm oxygen consumption during exercise by near infrared spectroscopy. Advances in Experimental Medicine and Biology 345, 685-692.
• Dehghani, H, Delpy, DT, and Arridge, SR (1999): Photon migration in non-scattering tissue and the effects on image reconstruction, Physics in Medicine and Biology 44(12), 2897-2906. Download PDF File.
• Dehghani, H, Arridge, SR, Schweiger, M, and Delpy, DT (2000): Optical tomography in the presence of void regions, Journal of the Optical Society of America A 17(9), 1659-1670. Download PDF file.
• Dehghani, H, and Delpy, DT (2000): Near infrared spectroscopy of the adult head: effect of scattering and absorbing obstructions in the CSF layer on light distribution in the tissue, Applied Optics 39, 4721-4729. Download PDF File.
• Dehghani, H, Arridge, SR, Schweiger, M, and Delpy, DT (2000): Image reconstruction in the presence of a void region, OSA Technical Digest, Biomedical Topical Meetings (OSA, Washington DC), 351-353.
• Dehghani, H, Hillman, EMC, Schweiger, M, Arridge SR, and Delpy, DT (2001): Optical tomography of a 3D multilayered head model, Proc. SPIE 4250, 45-52. Download PDF file
• Dehghani, H, and Delpy, DT (2002): Linear single step image reconstruction in the presence of non-scattering regions. Journal of the Optical Society of America A 19, 1162-1171. Download PDF file.
• Delpy, DT, Cope, M, Cady, EB, Wyatt, JS, Hamilton, PA, Hope, PL, Wray, S, and Reynolds, EOR (1987): Cerebral monitoring in newborn infants by magnetic resonance and near infrared spectroscopy. Scand. J. Clin. Lab. Invest. 47, suppl. 88, 9-17. Download PDF file.
• Delpy, DT, Cope, M, van der Zee, P, Arridge, S, Wray, S, and Wyatt, JS (1988): Estimation of optical pathlength through tissue from direct time of flight measurement. Physics in Medicine and Biology 33(12), 1433-1442. Download PDF file.
• Delpy, DT, Arridge, SR, Cope, M, Edwards, D, Reynolds, EOR, Richardson, CE, Wray, S, Wyatt, JS, and van der Zee, P (1989): Quantitation of pathlength in optical spectroscopy. Advances in Experimental Medicine & Biology 248, 41-46. Download PDF file.
• Delpy, DT, Arridge, SR, Cope, M, Edwards, D, Reynolds, EOR, Richardson, CE, Wray, S, Wyatt, JS, and van der Zee, P (1990): Optical spectroscopy of the neonatal brain and the development of tissue equivalent phantoms. In: Proceedings of the 2nd International Conference on Mind & Brain Science, Hamamatsu City, Japan, 182-187.
• Delpy, DT (1991): Future aspects of near infrared spectroscopy and imaging. In: Fetal and Neonatal Physiological Measurements. Editor: Lafeber, H, (Elsevier), 57-66.
• Delpy, DT (1994): Optical spectroscopy for diagnosis. Physics World (August 1994) 34-39.
• Delpy, DT, and Cope, M (1997): Quantification in tissue near-infrared spectroscopy. Philosophical Transactions of the Royal Society of London Series B-Biological Sciences 352(1354), 649-659. Download PDF File.
• De Visscher, G, Springett, R, Delpy, DT, Van Reempts, J, Borgers, M, and van Rossem, K (2002): Nitric oxide does not inhibit cerebral cytochrome oxidase "in vivo" nor in the reactive hyperaemic phase post brief anoxia in the adult rat. Journal of Cerebral Blood Flow & Metabolism 22, 515-519. Download PDF File.
• Dierkes, T, Grosenick, D, Moesta, KT, Möller, M, Schlag, PM, Rinneberg, H, and Arridge, SR (2005): Reconstruction of optical properties of phantom and breast lesion in vivo from paraxial scanning data, Physics in Medicine and Biology 50, 2519-2542. Download PDF file.
• Douiri, A, Schweiger, M, Riley, J, and Arridge, SR (2005): Adaptive diffusion regularization method of inverse problem for diffuse optical tomography, Proc. SPIE 5859, 585916.
• Douiri, A, Schweiger, M, Riley, J, and Arridge, SR (2005): Local diffusion regularisation method for optical tomography reconstruction using robust statistics, Optics Letters 30(18), 2439-2441. Download PDF File.
• Duncan, A, Whitlock, TL, Cope, M, and Delpy, DT (1993): A multiwavelength, wideband, intensity modulated optical spectrometer for near infrared spectroscopy and imaging. Proc. SPIE 1888, 248-257. Download PDF file
• Duncan, A, Meek, JH, Clemence, M, Elwell, CE, Tyszczuk, L, Cope, M, and Delpy, DT (1995): Optical pathlength measurements on adult head, calf and forearm and the head of the newborn-infant using phase-resolved optical spectroscopy. Physics in Medicine and Biology 40(2), 295-304. Download PDF file
• Duncan, A, Whitlock, TL, Cope, M, and Delpy, DT (1995): Measurement of changes in optical pathlength through human muscle during cuff occlusion on the arm. Optics and Laser Technology 27(4), 269-274. Download PDF file
• Duncan, A, Meek, JH, Clemence, M, Elwell, CE, Fallon, P, Tyszczuk, L, Cope, M, and Delpy, DT (1996): Measurement of cranial optical-path length as a function of age using phase-resolved near-infrared spectroscopy. Pediatric Research 39(5), 889-894. Download PDF file
  
• Eddowes, MH, Mills, TN, and Delpy, DT (1995): Monte Carlo simulations of coherent backscatter for identification of the optical coefficients of biological tissues in-vivo. Applied Optics 34(13), 2261-2267. Download PDF file
• Eddowes, MH, Mills, TN, and Delpy, DT (1995): Monte Carlo simulations of coherent backscatter for identification of the optical coefficients of biological tissues in vivo. Proc. SPIE 2326, 117-126. Download PDF file
• Edwards, AD, Richardson, C, Cope, M, Wyatt, JS, Delpy, DT, and Reynolds, EOR (1988): Cotside measurement of cerebral blood flow in ill newborn infants by near infrared spectroscopy. Lancet 2, 770-771.
• Edwards, AD, Wyatt, JS, Richardson, CE, Potter, A, Cope, M, Delpy, DT, and Reynolds, EOR (1990): Effects of indomethacin on cerebral haemodynamics and oxygen delivery investigated by near infrared spectroscopy in very preterm infants. Lancet i, 1491-1495.
• Edwards, AD, Brown, GC, Cope, M, Wyatt, JS, McCormick, DC, Roth, SC, Delpy, DT, and Reynolds, EOR (1991): Quantification of redox changes in human neonatal cerebral cytochrome oxidase. Journal of Applied Physiology 71(5), 1907-1913. Download PDF file
• Edwards, AD, McCormick, DC, Roth, SC, Elwell, CE, Peebles, DM, Cope, M, Wyatt, JS, Delpy, DT, and Reynolds, EOR (1992): Cerebral haemodynamic effects of natural surfactant administration investigated by near infrared spectroscopy. Pediatric Research 32, 532-536.
• Edwards, AD, Richardson, C, van der Zee, P, Elwell, CE, Wyatt, JS, Cope, M, Delpy, DT, and Reynolds, EOR (1993): Measurement of haemoglobin flow and blood flow by near infrared spectroscopy. Journal of Applied Physiology 75, 1884-1889. Download PDF file
• Elaloufi, R, and Arridge, SR (2005): Modelling the influence of interfaces and multiple layers on light propagation in a slab geometry with the radiative transfer equation, Proc. SPIE 5859, 585913.
• El-Desoky, A, Seifalian, AM, Cope, M, Delpy, DT, and Davidson, BR (1999): Experimental study of liver dysfunction evaluated by direct indocyanine green clearance using near infrared spectroscopy, British Journal of Surgery 86, 1005-1011. Download PDF File.
• El-Desoky, A, Seifalian, AM, Cope, M, Delpy, DT, and Davidson, BR (1999): Changes in tissue oxygenation of the porcine liver measured by near infrared spectroscopy, Liver Transplant Surgery 5, 219-226. Download PDF file
• El-Desoky, A, Delpy, DT, Davidson, BR, and Seifalian, A (2001): Assessment of hepatic ischaemia reperfusion injury by measuring intracellular tissue oxygenation using near infrared spectroscopy. Liver 21, 37-44. Download PDF File.
• Elwell, CE, Henty, JR, Leung, TS, Austin, T, Meek. JH, Delpy, DT, and Wyatt, JS (2005): Measurement of CMRO2 in neonates undergoing intensive care using near-infrared spectroscopy. Advances in Experimental Medicine and Biology 566, 263-268. Download PDF file.
• Elwell, CE, Cope, M, Edwards, AD, Wyatt, JS, Reynolds, EOR, and Delpy, DT (1992): Measurement of cerebral blood flow in adult humans using near infrared spectroscopy - methodology and possible errors. Advances in Experimental Medicine & Biology 317, 235-245. Download PDF file.
• Elwell, CE, Owen-Reece, H, Cope, M, Wyatt, JS, Edwards, AD, Delpy, DT, and Reynolds, EOR (1993): Measurement of adult cerebral haemodynamics using near infrared spectroscopy. Acta. Neurochir. Suppl 59, 74-80.
• Elwell, CE, Cope, M, Edwards, AD, Wyatt, JS, Delpy, DT, and Reynolds, EOR (1994): Quantification of adult cerebral hemodynamics by near-infrared spectroscopy. Journal of Applied Physiology 77(6), 2753-2760. Download PDF file
• Elwell, CE, Owen-Reece, H, Cope, M, Edwards, AD, Wyatt, JS, Reynolds, EOR, and Delpy, DT (1994): Measurement of changes in cerebral haemodynamics during inspiration and expiration using near infrared spectroscopy. Advances in Experimental Medicine & Biology 345, 619-626. Download PDF file.
• Elwell, CE, Cope, M, Kirkby, D, Owen-Reece, H, Cooper, CE, Reynolds, EOR, and Delpy, DT (1994): An automated system for the measurement of the responses of cerebral blood volume and cerebral blood flow to changes in arterial carbon dioxide tension using near infrared spectroscopy. Advances in Experimental Medicine & Biology 361, 143-155. Download PDF file.
• Elwell, CE, Owen-Reece, H, Wyatt, JS, Cope, M, Reynolds, EOR, and Delpy, DT (1996): Influence of respiration and changes in expiratory pressure on cerebral hemoglobin concentration measured by near-infrared spectroscopy. Journal of Cerebral Blood Flow and Metabolism 16(2), 353-357. Download PDF file
• Elwell, CE, Matcher, SJ, Tyszczuk, L, Meek, JH, and Delpy, DT (1997): Measurement of cerebral venous saturation in adults using near infrared spectroscopy. Advances in Experimental Medicine and Biology 411, 453-460. Download PDF file.
• Elwell, CE, Cope, M, and Delpy, DT (1997): An analytical method for determining cerebrovascular transit time using near infrared spectroscopy. Advances in Experimental Medicine and Biology 428, 561-568. Download PDF file.
• Elwell, CE, Springett, R, Hillman, E, and Delpy, DT (1999): Oscillations in cerebral haemodynamics - implications for functional activation studies. Advances in Experimental Medicine & Biology 471, 57-65. Download PDF file.
• Elwell, CE (2000): A day in the life of a research medical physicist, The Biochemist 22(2), 41-41. Download PDF File.
• Elwell, C, and Beard, P (2005): Shedding light on the brain, NIR News 16(7), 28-30. Download PDF file.
• Enfield, LC, Gibson, AP, Everdell, NL, Delpy, DT, Schweiger, M, Arridge, SR, Richardson, C, Keshtgar, M, Douek, M, and Hebden, JC (2007): Three-dimensional time-resolved optical mammography of the uncompressed breast, Applied Optics 46, 3628-3638. Download PDF file.
• Essenpreis, M, Elwell, CE, Cope, M, van der Zee, P, Arridge, SR, and Delpy, DT (1993): Spectral dependence of temporal point spread functions in human tissues. Applied Optics 32(4), 418-425. Download PDF file
• Essenpreis, M, Cope, M, Elwell, CE, Arridge, SR, van der Zee, P, and Delpy, DT (1993): Wavelength dependence of the differential pathlength factor and the log slope in time resolved tissue spectroscopy. Advances in Experimental Medicine & Biology 333, 9-20. Download PDF file.
• Everdell, NL, Gibson, AP, Tullis, IDC, Vaithianathan, T, Hebden, JC, and Delpy, DT (2005): A frequency multiplexed near infrared topography system for imaging functional activation in the brain, Review of Scientific Instruments 76, 093705. Download PDF file.
  
• Firbank, M, Hiraoka, M, and Delpy, DT (1993): Development of a stable and reproducible tissue equivalent phantom for use in near infrared spectroscopy and imaging. Proc SPIE 1888, 264-270. Download PDF file
• Firbank, M, Hiraoka, M, Essenpreis, M, and Delpy, DT (1993): Measurement of the optical properties of the skull in the wavelength range 650-950 nm. Physics in Medicine and Biology 38, 503-510. Download PDF file
• Firbank, M, and Delpy, DT (1993): A design for a stable and reproducible phantom for use in near-infrared imaging and spectroscopy. Physics in Medicine and Biology 38, 847-853. Download PDF file.
• Firbank, M, and Delpy, DT (1994): A phantom for the testing and calibration of near infrared spectrometers. Physics in Medicine and Biology 39, 1509-1513. Download PDF file
• Firbank, M, Oda, M, and Delpy, DT (1995): An improved design for a stable and reproducible phantom material for use in near-infrared spectroscopy and imaging. Physics in Medicine and Biology 40(5), 955-961. Download PDF file.
• Firbank, M, Schweiger, M, and Delpy, DT (1995): Investigation of "light piping" through clear regions of scattering objects. Proc. SPIE 2389, 167-173.
• Firbank, M, Arridge, SR, Schweiger, M, and Delpy, DT (1996): An investigation of light transport through scattering bodies with non-scattering regions. Physics in Medicine and Biology 41(4), 767-783. Download PDF file
• Firbank, M, Okada, E, and Delpy, DT (1997): Investigation of the effect of discrete absorbers upon the measurement of blood volume with near-infrared spectroscopy. Physics in Medicine and Biology 42(3), 465-477. Download PDF File.
• Firbank, M, Okada, E, and Delpy, DT (1998): A theoretical study of the signal contribution of regions of the adult head to near infrared spectroscopy studies of visual evoked responses. Neuroimaging 8, 69-78. Download PDF File.
• Firbank, M, Elwell, CE, Cooper, CE, and Delpy, DT (1998): Experimental and theoretical comparison of NIR spectroscopy measurements of cerebral hemoglobin changes. Journal of Applied Physiology 85(5), 1915-1921. Download PDF File.
  
• Gandjbakhche, AH, Chernomordik, V, Bonner, RF, Nossal, R, Weiss GH, and Hebden, JC (1996): Optical detection of abnormally absorbing regions in tissue, OSA Trends in Optics and Photonics on Advances in Optical Imaging and Photon Migration, Editors: Alfano, RR, and Fujimoto, JG, (OSA, Washington DC) 2, 183-189.
• Gandjbakhche, AH, Chernomordik, V, Bonner, RF, Hebden, JC, and Nossal, R (1997): Use of time-dependent contrast functions to discriminate between the scattering and absorption properties of abnormal regions hidden within a tissue-like phantom. Proc. SPIE 2979, 211-218. Download PDF file
• Gandjbakhche, AH, Chernomordik, V, Hebden, JC, and Nossal, R (1998): Time-dependent contrast functions for quantitative imaging in time-resolved transillumination experiments. Applied Optics 37(10), 1973-1981. Download PDF file.
• Gibson, A, Yusof, R, Dehghani, H, Riley, J, Everdell, N, Richards, R, Hebden, JC, Schweiger, M, Arridge, SR, and Delpy, DT (2003): Optical tomography of a realistic neonatal head phantom. Applied Optics 42, 3109-3116. Download PDF file.
• Gibson, AP, Riley, J, Schweiger, M, Hebden, JC, Arridge, SR, and Delpy, DT (2003): A method for generating patient-specific finite element meshes for head modelling. Physics in Medicine and Biology 48, 481-495. Download PDF file.
• Gibson, AP, Hebden, JC, and Arridge, SR (2005): Recent advances in diffuse optical imaging, Physics in Medicine and Biology 50, R1-R43. Download PDF file.
• Gibson, AP, Hebden, JC, Riley, J, Everdell, N, Schweiger, M, Arridge, SR, and Delpy, DT (2005): Linear and non-linear reconstruction for optical tomography of phantoms with non-scattering regions, Applied Optics 44(19), 3925-3936. Download PDF file.
• Gibson, AP, Austin, T, Everdell, N, Meek, JH, Wyatt, JS, Schweiger, M, Arridge, SR, Delpy, DT, and Hebden, JC (2005): 3D optical tomography of the neonatal brain, Proc. SPIE 5859, 58590E.
• Gibson, AP, Austin, T, Everdell, NL, Schweiger, M, Arridge, SR, Meek, JH, Wyatt, JS, Delpy, DT, and Hebden, JC (2005): Three-dimensional whole-head optical tomography of passive motor evoked responses in the neonate, Neuroimage 30, 521-528. Download PDF file.
• Gora, F, Shinde, S, Elwell, CE, Goldstone, JC, Cope, M, Delpy, DT, and Smith, M (2002): Measurement of cerebral blood flow in adults using near infrared spectroscopy and indocyanine green. Journal of Neurosurgery and Anesthesiology 14, 218-222. Download PDF File.
  
• Hall, DJ, Hebden, JC, and Delpy, DT (1995): Time resolved imaging of a solid breast phantom. Proc. SPIE 2389, 182-189.
• Hall, DJ, Hebden, JC, and Delpy, DT (1997): Imaging very-low-contrast objects in breastlike scattering media with a time-resolved method. Applied Optics 36(28), 7270-7276. Download PDF file.
• Hall, DJ, Hebden, JC, and Delpy, DT (1997): Evaluation of spatial resolution as a function of thickness for time-resolved optical imaging of highly scattering media. Medical Physics 24(3), 361-368. Download PDF file.
• Hargrave, P, Nicholson, PW, Delpy, DT, and Firbank, M (1996): Optical properties of multicellular tumor spheroids. Physics in Medicine and Biology 41(6), 1067-1072. Download PDF file
• Hebden, JC, Arridge, SR, and Delpy, DT (1993): Infrared lasers muscle in on medical imaging. Physics World 6(8), 23-24.
• Hebden, JC, and Delpy, DT (1994): Enhanced Time resolved imaging using a diffusion model of photon transport. Optics Letters 19, 311-313. Download PDF file
• Hebden, JC (1995): Imaging through scattering media using characteristics of the temporal distribution of transmitted laser-pulses. Optics and Laser Technology 27(4), 263-268. Download PDF file
• Hebden, JC, Hall, DJ, Delpy, DT (1995): The spatial-resolution performance of a time-resolved optical imaging-system using temporal extrapolation. Medical Physics 22(2), 201-208. Download PDF file.
• Hebden, JC, and Gandjbakhche, AH (1995): Experimental validation of an elementary formula for estimating spatial-resolution for optical transillumination imaging. Medical Physics 22(8), 1271-1272. Download PDF file.
• Hebden, JC, Hall, DJ, Firbank, M, and Delpy, DT (1995): Time-resolved optical imaging of a solid tissue-equivalent phantom. Applied Optics 34(34), 8038-8047. Download PDF file.
• Hebden, JC, and Arridge, SR (1996): Imaging through scattering media by the use of an analytical model of perturbation amplitudes in the time-domain. Applied Optics 35(34), 6788-6796. Download PDF file.
• Hebden, JC, and Arridge, SR (1996): Time resolved imaging of solid tissue phantoms using a perturbation model. OSA Trends in Optics and Photonics on Advances in Optical Imaging and Photon Migration, Editors: Alfano, RR, and Fujimoto, JG, (OSA, Washington DC) 2, 93-98.
• Hebden, JC, Arridge, SR, and Delpy, DT (1997): Optical imaging in medicine I: Experimental techniques. Physics in Medicine and Biology 42(5), 825-840. Download PDF file.
• Hebden, JC, Tziraki, M, and Delpy, DT (1997): Evaluation of the temporally extrapolated absorbance method for dual-wavelength imaging through tissuelike scattering media. Applied Optics 36(16), 3802-3810. Download PDF file.
• Hebden, JC, and Delpy, DT (1997): Diagnostic imaging with light. British Journal of Radiology 70, S206-S214.
• Hebden, JC, Arridge, SR, and Schweiger, M (1998): Investigation of alternative data types for time resolved optical tomography, OSA Trends in Optics and Photonics on Advances in Optical Imaging and Photon Migration, Editors: Alfano, RR, and Fujimoto, JG, (OSA, Washington DC) 21, 162-167.
• Hebden, JC (1998): Optical tomography: development of a new medical imaging modality. Proceedings of Second Mexican Symposium on Medical Physics, (AIP: New York) 440, 79-90.
• Hebden, JC, Schmidt, FEW, Fry, ME, Schweiger, M, Hillman, EMC, Delpy, DT, and Arridge, S (1999): Simultaneous reconstruction of absorption and scattering images using multi-channel measurement of purely temporal data, Opt. Lett. 24, 534-536. Download PDF file.
• Hebden, JC, Veenstra, H, Dehghani, H, Hillman, EMC, Schweiger, M, Arridge, SR, and Delpy, DT (2001): Three dimensional time-resolved optical tomography of a conical breast phantom, Applied Optics 40, 3278-3287. Download PDF file.
• Hebden, JC, Gonzalez, FM, Gibson, A, Hillman, EMC, Yusof, R, Everdell, N, Delpy, DT, Zaccanti, G, and Martelli, F (2002): Assessment of an in situ temporal calibration method for time-resolved optical tomography, Journal of Biomedical Optics 8, 87-92. Download PDF file.
• Hebden, JC, Gibson, A, Yusof, R, Everdell, N, Hillman, EMC, Delpy, DT, Arridge, SR, Austin, T, Meek, JH, and Wyatt, JS (2002): Three-dimensional optical tomography of the premature infant brain, Physics in Medicine and Biology 47, 4155-4166. Download PDF file.
• Hebden, JC (2002): Three-dimensional optical tomography of the newborn infant brain, Proc. of the IEEE Lasers & Electro-Optics Society Annual Meeting, 361-362. Download PDF File.
• Hebden, JC (2003): Advances in optical imaging of the newborn infant brain. Psychophysiology 40, 501-510. Download PDF file.
• Hebden, JC, Boas, DA, George, JS, and Durkin, AJ (2003): Topics in biomedical optics: introduction, Applied Optics 42, 2869-2870. Download PDF file.
• Hebden, JC, Gibson, A, Austin, T, Yusof, R, Everdell, N, Delpy, DT, Arridge, SR, Meek, JH, and Wyatt, JS (2004): Imaging changes in blood volume and oxygenation in the newborn infant brain using three-dimensional optical tomography, Physics in Medicine and Biology 49, 1117-1130. Download PDF file.
• Hebden, JC, Garcia Guerrero, JJ, Chernomordik, V, and Gandjbakhche, AH (2004): Experimental evaluation of an anisotropic scattering model of a slab geometry, Optics Letters 29, 2518-2520. Download PDF file.
• Hebden, JC, Yates, TD, Gibson, A, Everdell, N, Arridge, SR, Chicken, DW, Douek, M, and Keshtgar MRS (2005): Monitoring recovery after laser surgery of the breast with optical tomography: a case study, Applied Optics 44(10), 1898-1904. Download PDF file.
• Hebden, JC, Price, BD, Gibson, AP, and Royle, G (2006): A soft deformable tissue-equivalent phantom for diffuse optical tomography, Physics in Medicine and Biology 51, 5581-5590. Download PDF file.
• Hebden, JC, and Austin, T (2007): Optical tomography of the neonatal brain, European Radiology 17, 2926-2933. Download PDF file.
• Hebden, JC, Brunker, J, Correia, T, Price, BD, Gibson, AP, and Everdell, N (2008): An electrically-activated dynamic tissue-equivalent phantom for assessment of diffuse optical imaging systems, Physics in Medicine and Biology 53, 329-337. Download PDF file.
• Hebden, JC, Correia, T, Khakoo, I, Gibson, AP, and Everdell, N (2008): A dynamic optical imaging phantom based on an array of semiconductor diodes, Physics in Medicine and Biology 53, N407-N413. Download PDF file.
• Heino, J, Arridge, S, Sikora, J, and Somersalo, E (2003): Anisotropic effects in highly scattering media, Physical Review E 68, Article number 31908. Download PDF file.
• Hillman, EMC, Hebden, JC, Schmidt, FEW, Arridge, SR, Schweiger, M, Dehghani, H, and Delpy, DT (2000): Calibration techniques and datatype extraction for time-resolved optical tomography, Review of Scientific Instruments 71(9), 3415-3427. Download PDF file.
• Hillman, EMC, Hebden, JC, Schmidt, FEW, Arridge, SR, Fry, ME, Schweiger, M, and Delpy, DT (2000): Initial clinical testing of the UCL 32 channel time-resolved instrument for optical tomography. OSA Technical Digest, Biomedical Topical Meetings (OSA, Washington DC), 100-102.
• Hillman, EMC, Hebden, JC, Schweiger, M, Dehghani, H, Schmidt, FEW, Delpy, DT, and Arridge, SR (2001): Time resolved optical tomography of the human forearm, Physics in Medicine and Biology 41, 1117-1130. Download PDF file.
• Hillman, EMC, Dehghani, H, Hebden, JC, Arridge, SR, Schweiger, M, and Delpy, DT (2001): Differential imaging in heterogeneous media: limitations of linearization assumptions in optical tomography, Proc. SPIE 4250, 327-338. Download PDF file
• Hiraoka, M, Firbank, F, Essenpreis, M, Cope, M, Arridge, SR, van der Zee, P, and Delpy, DT (1993): A Monte Carlo investigation of optical pathlength in inhomogeneous tissue and its application to near-infrared spectroscopy. Physics in Medicine and Biology 38, 1859-1876. Download PDF file
• Hiraoka, M, Firbank, M, Essenpreis, M, Cope, M, Arridge, SR, van der Zee, P, and Delpy, DT (1993): Monte Carlo simulation of light transport through inhomogeneous tissue. Proc. SPIE 1888, 149-159. Download PDF file
• Hiraoka, M, Arridge, SR, and Delpy, DT (1994): A new Monte Carlo algorithm for the description of light transport in tissue. Proc. 7th International Workshop on Multiple Scattering Lidar experiments (MUSCLE7), (Remote Sensing & Image Research Center, Chiba University, Chiba city Japan), 74-77.
• Hollis, VS, Binzoni, T, and Delpy, DT (2001): Noninvasive monitoring of brain tissue temperature by near-infrared spectroscopy, Proc. SPIE 4250, 470-481. Download PDF file
• Honjyo, K, Okada, E, Maki, A, and Delpy, DT (2000): The contribution of blood oxygenation changes in the capillary bed and a small blood vessel on the brain surface to NIRS signals. OSA Technical Digest, Biomedical Topical Meetings (OSA, Washington DC), 289-291.
• Horesh, L, Schweiger, M, Bollhöfer, M, Douiri, A, Arridge, SR, and Holder, DS (2006): Multilevel preconditioning for 3D large-scale soft field medical applications modelling, Information and Systems Sciences, Special Issue on Computational Aspects of Soft Field Tomography 532-556. Download PDF file.
• Hunt K, Tachtsidis I, Bleasdale-Barr K, Elwell C, Mathias C, Smith M (2006): Changes in cerebral oxygenation and haemodynamics during postural blood pressure changes in patients with autonomic failure. Physiological Measurement 27(9), 777-85. Download PDF file.
• Hutchinson, IL, Cope, M, Delpy, DT, Richardson, CE, and Harris, M (1990): The investigation of osteoradionecrosis of the mandible by near infrared spectroscopy. British Journal of Oral & Maxilliofacial Surgery 28, 150-154.
• Joshi, MS, and Leung, TS (2007): Using Monte Carlo simulation and importance sampling to rapidly obtain jump-diffusion prices of continuous barrier options, Journal of Computational Finance 10(4), 93-105. Download PDF file.
  
• Kirkby, DR, and Delpy, DT (1995): Measurement of tissue temporal point spread function (TPSF) by use of a cross correlation technique with an avalanche photodiode detector. Proc. SPIE 2389, 190-197.
• Kirkby, DR, and Delpy, DT (1996): Measurement of tissue temporal point-spread function (TPSF) by use of a gain-modulated avalanche photodiode detector. Physics in Medicine and Biology 41(5), 939-949. Download PDF file
• Kirkby, DR, and Delpy, DT (1996): An optoelectronic cross correlator using a gain modulated avalanche photodiode for measurement of the tissue temporal point spread function. OSA TOPS on Advances in Optical Imaging and Photon Migration 2, 108-112.
• Kirkby, DR, and Delpy, DT (1997): Parallel operation of Monte Carlo simulations on a diverse network of computers. Physics in Medicine and Biology 42(6), 1203-1208. Download PDF File.
• Kolehmainen, V, Arridge, SR, Lionheart, WRB, Vauhkonen, and Kaipio, JP (1999): Recovery of region boundaries of piecewise constant coefficients of an elliptic PDE from boundary data, Inverse Problems 15, 1375-1391. Download PDF File.
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• Lamont, M, and Beard, PC (2006): 2D imaging of ultrasound fields using a CCD array to detect the output of a Fabry Perot polymer film sensor, Electronics Letters 42(3), 187-189. Download PDF file.
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• Schweiger, M, and Arridge, SR (2001): Fast 3D image reconstruction in optical tomography using a coarse-gain parallelization strategy, Proc. SPIE 4250, 93-100. Download PDF file
• Schweiger, M, Gibson, AP, and Arridge, SR (2003): Computational aspects of diffuse optical tomography, IEEE Computing in Science and Engineering Nov/Dec 2003, 33-41. Download PDF File.
• Schweiger, M, Arridge, SR, and Nissilä, I (2005): Gauss–Newton method for image reconstruction in diffuse optical tomography, Physics in Medicine and Biology 50, 2365-2386. Download PDF file.
• Schweiger, M, Arridge, SR, Dorn, O, Zacharopoulos, A, and Kolehmainen, V (2006): Reconstructing absorption and diffusion shape profiles in optical tomography using a level set technique, Optics Letters 31(4), 471-473. Link to online paper.
• Schweiger, M, Dorn, O, and Arridge, SR (2008), 3-D shape and contrast reconstruction in optical tomography with level sets, Proc. 4th AIP International Conference and the 1st Congress of the IPIA, 25-29 June 2007, University of British Columbia Campus, Vancouver, Canada, Journal of Physics: Conference Series 124, 012043, IOP Publishing. Link to online paper.
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• Seifalian, AM, El-Desoky, A, Delpy, DT, and Davidson, BR (2001): Effect of graded hypoxia on the rat hepatic tissue oxygenation and energy metabolism monitored by near infrared and 31P nuclear magnetic resonance spectroscopy. FASEB J 15, 2642-2648. Download PDF File.
• Seifalian, AM, El-Desoky, A, Delpy, DT, and Davidson, BR (2002): Effect of heptic ischaemia/reperfusion injury in a rabbit model of Indocyanine Green clearance. Clinical Sciences, 102, 579-586. Download PDF File.
• Sikora, J, Zacharopoulos, A, Douiri, A, Schweiger, M, Horesh, L, Arridge, SR, and Ripoll, J (2006): Diffuse photon propagation in multilayered Geometries, Physics in Medicine and Biology 51, 497-516. Link to online paper.
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• Simpson, CR, Kohl, M, Essenpreis, M, and Cope, M (1998): Near infrared optical properties of ex-vivo human skin and sub-cutaneous tissues measured using the Monte Carlo inversion technique. Physics in Medicine and Biology 43(9), 2465-2478. Download PDF File.
• Soloviev, VY, Tahir, KB, McGinty, J, Elson, DS, Neil, MAA, French, PMW, and Arridge, SR (2007): Fluorescence lifetime imaging by using time-gated data acquisition, Applied Optics 46, 7384-7391.
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• Sorensen, LC, Leung, TS, and Greisen, G (2008): Comparison of cerebral oxygen saturation in premature infants by near-infrared spatially resolved spectroscopy: observations on probe-dependent bias, J. Biomed. Opt. 13, 064013. Download PDF file.
• Springett, R, Newman, J, Delpy, DT, and Cope, M (1999): Oxygen dependency of cerebral CuA redox state during increased oxygen consumption produced by infusion of a mitochondrial uncoupler in new born piglets, Advances in Experimental Medicine and Biology 471, 181-188. Download PDF file.
• Springett, R, Wylezinska, M, Cady, EB, Cope, M, and Delpy, DT (2000): Oxygen dependency of cerebral oxidative phosphorylation in new born piglets, Journal of Cerebral Blood Flow & Metabolism 20, 280-289. Download PDF File.
• Springett, R, Newman, J, Cope, M, and Delpy, DT (2000): Oxygen dependency and precision of the cytochrome oxidase signal from full spectral NIRS of the piglet brain, American Journal of Physiology, Heart and Circulation 279, H2202-2209. Download PDF File.
• Springett, R, Wylezinska, M, Cady, EB, Hollis, V, Cope, M, and Delpy, DT (2000): The oxygen dependency of cerebral oxidative metabolism in the newborn piglet studied with 31P NMRS and NIRS, Advances in Experimental Medicine and Biology (In press).
• Springett, R, Sakata, Y, and Delpy, DT (2001): Precise measurement of cerebral blood flow in newborn piglets from the bolus passage of indocyanine green, Physics in Medicine and Biology 46, 2209-2225. Download PDF File.
• Stott, JJ, Culver, JP, Arridge, SR, and Boas, DA (2003): Optode positional calibration in diffuse optical tomography, Applied Optics 42, 3154-3162. Download PDF file.
  
• Tachtsidis, I, Elwell, CE, Leung, TS, Lee, C-W, Smith, M, and Delpy, DT (2004): Investigation of cerebral haemodynamics by near infrared spectroscopy in young healthy volunteers reveals posture dependent spontaneous oscillations, Physiological Measurement 25(2), 437-445. Download PDF file.
• Tachtsidis I, Elwell, CE, Lee, CW, Leung, TS, Smith, M, Delpy, DT (2004): Spectral characteristics of spontaneous oscillations in cerebral haemodynamics are posture dependent, Advances in Experimental Medicine and Biology 540, 31-36. Download PDF file.
• Tachtsidis, I, Elwell, CE, Leung, TS, Bleasdale-Barr, K, Hunt, K, Toms, N, Smith, M, Mathias, CJ, and Delpy, DT (2005): Rate of change in cerebral oxygenation and blood pressure in response to passive changes in posture: a comparison between Pure Autonomic Failure patients and Controls. Advances in Experimental Medicine and Biology 566, 187-193. Download PDF file.
• Tachtsidis, I, Leung, T, Oliver, C, Henty, J, Jones, H, Smith, M, Deply, DT, and Elwell, CE (2006): Quantification of adult cerebral blood volume using the NIRS tissue oxygenation index, Advances in Experimental Medicine and Biology 578, 237-243. Download PDF file.
• Tachtsidis, I, Tisdall, MM, Leung, TS, Cooper, CE, Delpy, DT, Smith, M, and Elwell, CE (2007): Investigation of in-vivo measurement of cerebral cytochrome-c-oxidase redox changes using near-infrared spectroscopy in patients with orthostatic hypotension, Physiological Measurements 28, 199-211. Download PDF file.
• Tachtsidis, I, Leung, TS, Devoto, L, Delpy, DT, and Elwell CE (2008): Measurement of frontal lobe functional activation and related systemic effects: a near-infrared spectroscopy investigation, Advances in Experimental Medicine and Biology 614, 397-403. Download PDF file.
• Tachtsidis, I, Tisdall, M, Delpy, DT, Smith, M, and Elwell, CE (2008): Measurement of cerebral tissue oxygenation in young healthy volunteers during acetazolamide provocation: a transcranial Doppler and near-infrared spectroscopy investigation, Advances in Experimental Medicine and Biology 614, 389-396. Download PDF file.
• Tachtsidis, I, Leung, TS, Tisdall, MM, Devendra, P, Smith, M, Delpy, DT, and Elwell, CE (2008): Investigation of frontal cortex, motor cortex and systemic haemodynamic changes during anagram solving, Advances in Experimental Medicine and Biology 614, 21-28. Download PDF file.
• Tachtsidis, I, Tisdall, MM, Leung, TS, Pritchard, C, Cooper, CE, Smith, M, and Elwell CE (2009): Relationship between brain tissue haemodynamics, oxygenation and metabolism in the healthy human adult brain during hyperoxia and hypercapnea. Adv Exp Med Biol. 645, 315-20. Download PDF file.
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• Tarvainen, T, Vauhkonen, M, Kolehmainen, V, Arridge, SR, and Kaipio JP (2005): Coupled radiative transfer equation and diffusion approximation model for photon migration in turbid medium with low-scattering and non-scattering regions, Physics in Medicine and Biology 50, 4913-4930. Download PDF File.
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